Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein hupe | DC415_02450 | Not Available | Negative | 495487 - 496077 | 19541.4 |
| atp-dependent clp protease proteolytic subunit | DC415_02455 | Not Available | Positive | 496313 - 496894 | 21383.6 |
| benzoate transporter | DC415_02460 | Not Available | Positive | 497254 - 498450 | 40561.7 |
| 2-isopropylmalate synthase | DC415_02465 | Not Available | Positive | 498767 - 500476 | 63109.1 |
| hypothetical protein | DC415_02470 | Not Available | Positive | 500690 - 500986 | 11318.2 |
| metallophosphatase | DC415_02475 | Not Available | Negative | 500998 - 501963 | 35335.3 |
| nudix domain-containing protein | DC415_02480 | Not Available | Positive | 502172 - 502570 | 14883.5 |
| glutathione-dependent reductase | DC415_02485 | Not Available | Negative | 502561 - 503565 | 38622.4 |
| gnat family n-acetyltransferase | DC415_02490 | Not Available | Positive | 503855 - 504421 | 20467.7 |
| mfs transporter | DC415_02495 | Not Available | Positive | 504513 - 505826 | 46240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


