Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DC415_02400 | Not Available | Positive | 484680 - 486908 | 80334.6 |
| extensin | DC415_02405 | Not Available | Negative | 486977 - 487927 | 34282.4 |
| anthranilate synthase component i | DC415_02410 | Not Available | Positive | 488224 - 490413 | 80687.2 |
| tigr02117 family protein | DC415_02415 | Not Available | Positive | 490475 - 491194 | 25702.1 |
| amino acid transporter | DC415_02420 | Not Available | Positive | 491328 - 491960 | 21668.3 |
| flavin-nucleotide-binding protein | DC415_02425 | Not Available | Positive | 492048 - 492509 | 16969.2 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DC415_02430 | Not Available | Positive | 492580 - 492975 | 14967.8 |
| cation transporter | DC415_02435 | Not Available | Positive | 493102 - 494019 | 32340.5 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DC415_02440 | Not Available | Positive | 494023 - 494487 | 16935.2 |
| duf2076 domain-containing protein | DC415_02445 | Not Available | Negative | 494588 - 495385 | 27866.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


