Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DC415_02350 | Not Available | Negative | 474944 - 475261 | 11215.5 |
| choline abc transporter atp-binding protein | DC415_02355 | Not Available | Negative | 475731 - 476777 | 37912.1 |
| choline abc transporter permease subunit | DC415_02360 | Not Available | Negative | 476774 - 477625 | 30588.9 |
| choline abc transporter substrate-binding protein | DC415_02365 | Not Available | Negative | 477719 - 478678 | 34092.7 |
| thymidine kinase | DC415_02370 | Not Available | Positive | 478971 - 479552 | 21613.9 |
| pseudoazurin | DC415_02375 | Not Available | Positive | 479663 - 480112 | 15747.4 |
| hypothetical protein | DC415_02380 | Not Available | Positive | 480312 - 481343 | 38975.4 |
| duf2333 domain-containing protein | DC415_02385 | Not Available | Positive | 481449 - 482648 | 43996.8 |
| luxr family transcriptional regulator | DC415_02390 | Not Available | Negative | 482801 - 483517 | 26845.7 |
| tigr00645 family protein | DC415_02395 | Not Available | Negative | 483794 - 484315 | 19223.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


