Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_02300 | Not Available | Positive | 461898 - 462569 | 23528.5 |
| ribosome biogenesis gtpase der | DC415_02305 | Not Available | Positive | 462697 - 464121 | 53047.5 |
| duf2026 domain-containing protein | DC415_02310 | Not Available | Positive | 464296 - 464904 | 22341.7 |
| alpha-mannosyltransferase | DC415_02315 | Not Available | Negative | 465099 - 466148 | 38452.2 |
| 2-dehydro-3-deoxygluconokinase | DC415_02320 | Not Available | Negative | 466344 - 467228 | 31344.0 |
| alpha-glucosidase | DC415_02325 | Not Available | Positive | 467428 - 469101 | 63141.1 |
| phosphohydrolase | DC415_02330 | Not Available | Negative | 469127 - 470080 | 35108.2 |
| adenine deaminase | DC415_02335 | Not Available | Negative | 470218 - 471924 | 61128.9 |
| branched chain amino acid abc transporter substrate-binding protein | DC415_02340 | Not Available | Negative | 472088 - 473194 | 37364.5 |
| adenylate cyclase | DC415_02345 | Not Available | Positive | 473498 - 474667 | 42245.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


