Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase accessory protein xdhc | DC415_02250 | Not Available | Negative | 449088 - 449870 | 27706.7 |
| xanthine dehydrogenase molybdopterin binding subunit | DC415_02255 | Not Available | Negative | 449929 - 452220 | 83548.2 |
| xanthine dehydrogenase small subunit | DC415_02260 | Not Available | Negative | 452272 - 453741 | 53266.6 |
| 3-hydroxybutyrate dehydrogenase | DC415_02265 | Not Available | Negative | 453802 - 454578 | 27311.9 |
| glycerol kinase | DC415_02270 | Not Available | Positive | 454735 - 456228 | 54580.3 |
| llm class flavin-dependent oxidoreductase | DC415_02275 | Not Available | Positive | 456373 - 457434 | 38665.4 |
| type i methionyl aminopeptidase | DC415_02280 | Not Available | Positive | 457490 - 458242 | 27005.0 |
| peptide antibiotic transporter sbma | DC415_02285 | Not Available | Positive | 458427 - 459701 | 48472.9 |
| polysaccharide deacetylase | DC415_02290 | Not Available | Negative | 459865 - 460857 | 36595.2 |
| nnru family protein | DC415_02295 | Not Available | Positive | 461155 - 461739 | 21619.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


