Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase | DC415_02200 | Not Available | Negative | 438291 - 439448 | 42611.8 |
| tetr family transcriptional regulator | DC415_02205 | Not Available | Negative | 439566 - 440168 | 21655.8 |
| oxidoreductase | DC415_02210 | Not Available | Positive | 440247 - 440954 | 24435.2 |
| lysr family transcriptional regulator | DC415_02215 | Not Available | Negative | 441028 - 441924 | 32745.7 |
| hypothetical protein | DC415_02220 | Not Available | Positive | 442043 - 442432 | 14267.7 |
| ester cyclase | DC415_02225 | Not Available | Negative | 442448 - 442834 | 14569.3 |
| methyl-accepting chemotaxis protein | DC415_02230 | Not Available | Negative | 443067 - 445037 | 69226.5 |
| guanine deaminase | DC415_02235 | Not Available | Negative | 445287 - 446594 | 48163.8 |
| cysteine desulfurase | DC415_02240 | Not Available | Negative | 446591 - 447838 | 46548.8 |
| lysr family transcriptional regulator | DC415_02245 | Not Available | Negative | 447951 - 448865 | 34069.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


