Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid oxidase | DC415_02150 | Not Available | Positive | 430671 - 431864 | 42257.5 |
| duf1045 domain-containing protein | DC415_02155 | Not Available | Positive | 431970 - 432677 | 26251.5 |
| allantoinase puue | DC415_02160 | Not Available | Positive | 432807 - 433730 | 35066.4 |
| ohcu decarboxylase | DC415_02165 | Not Available | Positive | 433730 - 434233 | 18282.7 |
| nucleotidyltransferase | DC415_02170 | Not Available | Positive | 434296 - 434589 | 10834.9 |
| hypothetical protein | DC415_02175 | Not Available | Positive | 434586 - 434948 | 13606.5 |
| ureidoglycolate lyase | DC415_02180 | Not Available | Positive | 434952 - 435452 | 18684.1 |
| hydroxyisourate hydrolase | DC415_02185 | Not Available | Positive | 435449 - 435805 | 12997.5 |
| yfce family phosphodiesterase | DC415_02190 | Not Available | Positive | 435811 - 436551 | 26999.1 |
| peptidase m15 | DC415_02195 | Not Available | Negative | 436582 - 437853 | 45683.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


