Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vapc toxin family pin domain ribonuclease | DC415_24180 | Not Available | Negative | 5157886 - 5158293 | 15287.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | DC415_24185 | Not Available | Negative | 5158293 - 5158523 | 8503.02 |
| restriction endonuclease | DC415_24190 | Not Available | Negative | 5158701 - 5159612 | 33870.3 |
| toxin hipa | DC415_24195 | Not Available | Negative | 5159762 - 5161015 | 45224.4 |
| transcriptional regulator | DC415_24200 | Not Available | Negative | 5161008 - 5161319 | 10948.2 |
| hypothetical protein | DC415_24210 | Not Available | Negative | 5162074 - 5162712 | 23616.2 |
| hypothetical protein | DC415_24215 | Not Available | Negative | 5162843 - 5163223 | 14176.2 |
| hypothetical protein | DC415_24220 | Not Available | Negative | 5163437 - 5163634 | 7375.32 |
| nucleotidyltransferase | DC415_24225 | Not Available | Negative | 5164552 - 5165475 | 36009.9 |
| duf3606 domain-containing protein | DC415_24230 | Not Available | Positive | 5165809 - 5165988 | 6656.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


