Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | DC415_24115 | Not Available | Positive | 5148665 - 5149276 | 21830.4 |
| prevent-host-death family protein | DC415_24120 | Not Available | Positive | 5149488 - 5149754 | 9931.77 |
| hypothetical protein | DC415_24125 | Not Available | Positive | 5149751 - 5150167 | 15886.1 |
| mfs transporter | DC415_24130 | Not Available | Negative | 5150383 - 5151621 | 43590.4 |
| transcriptional regulator | DC415_24135 | Not Available | Positive | 5152042 - 5152293 | 9436.11 |
| hypothetical protein | DC415_24145 | Not Available | Positive | 5152966 - 5153793 | 31437.8 |
| hypothetical protein | DC415_24150 | Not Available | Positive | 5153780 - 5154700 | 34830.4 |
| transcriptional regulator | DC415_24155 | Not Available | Negative | 5154727 - 5155095 | 13545.1 |
| hypothetical protein | DC415_24160 | Not Available | Negative | 5155092 - 5155382 | 11049.3 |
| is21 family transposase | DC415_24175 | Not Available | Positive | 5157005 - 5157847 | 32205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


