Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | DC415_24005 | Not Available | Negative | 5127673 - 5130576 | 108601.0 |
| dna resolvase | DC415_24010 | Not Available | Positive | 5130672 - 5131274 | 22145.7 |
| prolyl aminopeptidase | DC415_24015 | Not Available | Positive | 5131358 - 5132305 | 35054.6 |
| gnat family n-acetyltransferase | DC415_24020 | Not Available | Positive | 5132519 - 5133379 | 32019.6 |
| hypothetical protein | DC415_24025 | Not Available | Negative | 5133495 - 5134550 | 38140.7 |
| hypothetical protein | DC415_24030 | Not Available | Positive | 5134589 - 5134793 | 7965.57 |
| duf3606 domain-containing protein | DC415_24035 | Not Available | Negative | 5135094 - 5135273 | 6656.56 |
| nucleotidyltransferase | DC415_24040 | Not Available | Positive | 5135607 - 5136530 | 35681.6 |
| hypothetical protein | DC415_24050 | Not Available | Positive | 5137476 - 5138474 | 35965.4 |
| integron | DC415_24055 | Not Available | Positive | 5138584 - 5138988 | 14411.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


