Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DC415_23805 | Not Available | Positive | 5090496 - 5092226 | 63399.7 |
| mandelate racemase/muconate lactonizing enzyme family protein | DC415_23810 | Not Available | Positive | 5092483 - 5093670 | 44645.1 |
| galactose mutarotase | DC415_23815 | Not Available | Positive | 5093657 - 5094544 | 32773.9 |
| nad-dependent dehydratase | DC415_23820 | Not Available | Positive | 5094541 - 5095344 | 29420.0 |
| mannonate dehydratase | DC415_23825 | Not Available | Positive | 5095441 - 5096415 | 36583.6 |
| 5-dehydro-4-deoxyglucarate dehydratase | DC415_23830 | Not Available | Positive | 5096444 - 5097346 | 32073.7 |
| dihydrodipicolinate synthase family protein | DC415_23835 | Not Available | Negative | 5097748 - 5098638 | 31652.8 |
| hypothetical protein | DC415_23840 | Not Available | Negative | 5098783 - 5100079 | 46958.2 |
| hypothetical protein | DC415_23845 | Not Available | Negative | 5100271 - 5100960 | 24139.7 |
| hypothetical protein | DC415_23850 | Not Available | Negative | 5101085 - 5101534 | 16274.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


