Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_02050 | Not Available | Negative | 407285 - 407764 | 17805.1 |
| lysr family transcriptional regulator | DC415_02055 | Not Available | Negative | 407931 - 408917 | 35779.8 |
| sugar abc transporter substrate-binding protein | DC415_02060 | Not Available | Positive | 409185 - 410249 | 38094.4 |
| sugar abc transporter atp-binding protein | DC415_02065 | Not Available | Positive | 410340 - 411875 | 56558.5 |
| sugar abc transporter permease | DC415_02070 | Not Available | Positive | 411875 - 413071 | 42356.3 |
| gguc protein | DC415_02075 | Not Available | Positive | 413171 - 414166 | 35608.1 |
| lactoylglutathione lyase | DC415_02080 | Not Available | Negative | 414390 - 414797 | 15169.9 |
| histidine kinase | DC415_02085 | Not Available | Positive | 415120 - 416706 | 58907.1 |
| duf1349 domain-containing protein | DC415_02090 | Not Available | Positive | 416964 - 417548 | 22010.8 |
| sam-dependent methyltransferase | DC415_02095 | Not Available | Negative | 417982 - 418575 | 21473.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


