Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DC415_23705 | Not Available | Positive | 5067853 - 5068773 | 32804.6 |
| multidrug abc transporter atp-binding protein | DC415_23710 | Not Available | Positive | 5069048 - 5070826 | 64795.9 |
| hypothetical protein | DC415_23715 | Not Available | Negative | 5070874 - 5071140 | 9737.89 |
| tetr family transcriptional regulator | DC415_23720 | Not Available | Positive | 5071289 - 5071900 | 21958.2 |
| sdr family oxidoreductase | DC415_23725 | Not Available | Negative | 5072069 - 5072854 | 27974.4 |
| dna-binding transcriptional regulator | DC415_23730 | Not Available | Negative | 5072883 - 5073812 | 33338.4 |
| glycerol kinase | DC415_23735 | Not Available | Negative | 5073855 - 5075324 | 51501.4 |
| transketolase family protein | DC415_23740 | Not Available | Negative | 5075464 - 5076420 | 33298.4 |
| transketolase | DC415_23745 | Not Available | Negative | 5076420 - 5077229 | 29517.1 |
| sugar abc transporter permease | DC415_23750 | Not Available | Positive | 5077461 - 5078441 | 33739.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


