Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | DC415_23655 | Not Available | Positive | 5058545 - 5059231 | 25200.9 |
| aspartate aminotransferase family protein | DC415_23660 | Not Available | Positive | 5059246 - 5060658 | 52569.6 |
| arginase | DC415_23665 | Not Available | Positive | 5060663 - 5061613 | 35217.1 |
| permease | DC415_23670 | Not Available | Positive | 5061610 - 5061960 | 12406.5 |
| carboxylesterase | DC415_23675 | Not Available | Positive | 5061957 - 5062862 | 33661.6 |
| gnat family n-acetyltransferase | DC415_23680 | Not Available | Positive | 5062840 - 5064003 | 44416.2 |
| transporter | DC415_23685 | Not Available | Positive | 5064000 - 5064398 | 14257.4 |
| transporter | DC415_23690 | Not Available | Positive | 5064541 - 5065998 | 51432.4 |
| abc transporter permease | DC415_23695 | Not Available | Positive | 5065995 - 5067131 | 39760.6 |
| abc transporter atp-binding protein | DC415_23700 | Not Available | Positive | 5067135 - 5067848 | 25480.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


