Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain-containing protein | DC415_23495 | Not Available | Positive | 5012772 - 5013350 | 21232.4 |
| hypothetical protein | DC415_23500 | Not Available | Positive | 5013501 - 5015861 | 90123.9 |
| aaa family atpase | DC415_23505 | Not Available | Positive | 5016219 - 5017214 | 37606.5 |
| hypothetical protein | DC415_23510 | Not Available | Positive | 5017227 - 5019563 | 84935.1 |
| transposase | DC415_23515 | Not Available | Positive | 5019580 - 5020980 | 53422.2 |
| hypothetical protein | DC415_23520 | Not Available | Negative | 5021345 - 5021653 | 11374.3 |
| hypothetical protein | DC415_23530 | Not Available | Positive | 5026712 - 5032879 | 228199.0 |
| sir2 family nad-dependent protein deacetylase | DC415_23535 | Not Available | Negative | 5033029 - 5033844 | 31013.4 |
| non-canonical purine ntp pyrophosphatase | DC415_23540 | Not Available | Negative | 5033837 - 5034394 | 20781.8 |
| adenosine deaminase | DC415_23545 | Not Available | Positive | 5034467 - 5035429 | 34916.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


