Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | DC415_23445 | Not Available | Positive | 5002584 - 5004278 | 62134.4 |
| ornithine cyclodeaminase | DC415_23450 | Not Available | Positive | 5004346 - 5005497 | 42279.4 |
| hypothetical protein | DC415_23455 | Not Available | Positive | 5005585 - 5005935 | 12457.6 |
| hypothetical protein | DC415_23460 | Not Available | Negative | 5006053 - 5006250 | 7347.87 |
| adenylosuccinate lyase family protein | DC415_23465 | Not Available | Negative | 5006505 - 5007824 | 47621.4 |
| tripartite tricarboxylate transporter substrate binding protein | DC415_23470 | Not Available | Negative | 5007887 - 5008858 | 33267.3 |
| gntr family transcriptional regulator | DC415_23475 | Not Available | Positive | 5009013 - 5010113 | 40622.5 |
| small permease of tripartite tricarboxylate transporter | DC415_23480 | Not Available | Positive | 5010139 - 5010600 | 16271.6 |
| hypothetical protein | DC415_23485 | Not Available | Positive | 5010610 - 5012112 | 52618.2 |
| excisionase | DC415_23490 | Not Available | Positive | 5012336 - 5012782 | 16325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


