Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-activating lysine-acyltransferase | DC415_23395 | Not Available | Positive | 4993737 - 4994174 | 16539.8 |
| hlyd family type i secretion periplasmic adaptor subunit | DC415_23400 | Not Available | Negative | 4994185 - 4995477 | 46960.3 |
| abc transporter | DC415_23405 | Not Available | Negative | 4995481 - 4997085 | 58099.3 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DC415_23410 | Not Available | Negative | 4998030 - 4998323 | 10709.0 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | DC415_23415 | Not Available | Negative | 4998320 - 4998628 | 11089.2 |
| asnc family transcriptional regulator | DC415_23420 | Not Available | Negative | 4998889 - 4999302 | 14931.2 |
| amino acid abc transporter substrate-binding protein | DC415_23425 | Not Available | Positive | 4999545 - 5000318 | 27867.8 |
| nickel transporter | DC415_23430 | Not Available | Positive | 5000492 - 5001154 | 23254.0 |
| amino acid abc transporter permease | DC415_23435 | Not Available | Positive | 5001151 - 5001807 | 23571.3 |
| polar amino acid abc transporter atp-binding protein | DC415_23440 | Not Available | Positive | 5001804 - 5002568 | 28155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


