Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_23345 | Not Available | Positive | 4982866 - 4983102 | 8893.72 |
| abc transporter atp-binding protein | DC415_23350 | Not Available | Positive | 4983132 - 4984226 | 39434.7 |
| rok family protein | DC415_23355 | Not Available | Negative | 4984245 - 4984940 | 25280.6 |
| glucose-6-phosphate dehydrogenase | DC415_23360 | Not Available | Negative | 4984959 - 4986329 | 50464.4 |
| decarboxylating 6-phosphogluconate dehydrogenase | DC415_23365 | Not Available | Negative | 4986348 - 4987352 | 35401.2 |
| glucan 1,4-alpha-glucosidase | DC415_23370 | Not Available | Negative | 4987354 - 4989783 | 88699.8 |
| hypothetical protein | DC415_23375 | Not Available | Negative | 4990116 - 4990293 | 5990.13 |
| is110 family transposase | DC415_23380 | Not Available | Positive | 4990294 - 4990532 | 8652.14 |
| magnesium and cobalt transport protein cora | DC415_23385 | Not Available | Positive | 4990835 - 4991800 | 36485.5 |
| hypothetical protein | DC415_23390 | Not Available | Negative | 4992071 - 4992733 | 23988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


