Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DC415_23240 | Not Available | Negative | 4958114 - 4958842 | 27515.7 |
| mandelate racemase/muconate lactonizing enzyme family protein | DC415_23245 | Not Available | Positive | 4959005 - 4960207 | 44359.0 |
| gluconate 5-dehydrogenase | DC415_23250 | Not Available | Positive | 4960218 - 4960988 | 27189.5 |
| murr/rpir family transcriptional regulator | DC415_23255 | Not Available | Negative | 4961009 - 4961932 | 33363.7 |
| mfs transporter | DC415_23260 | Not Available | Positive | 4962032 - 4963396 | 49255.6 |
| gaf domain-containing protein | DC415_23265 | Not Available | Positive | 4963457 - 4963933 | 17698.1 |
| peptidase m38 | DC415_23270 | Not Available | Positive | 4963979 - 4965205 | 43368.2 |
| carbohydrate kinase | DC415_23275 | Not Available | Negative | 4965236 - 4966603 | 48900.0 |
| l-rhamnose mutarotase | DC415_23280 | Not Available | Negative | 4966600 - 4966923 | 12306.8 |
| branched-chain amino acid abc transporter permease | DC415_23285 | Not Available | Negative | 4966927 - 4967937 | 35582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


