Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DC415_23185 | Not Available | Negative | 4948984 - 4949688 | 26214.5 |
| alkanesulfonate monooxygenase | DC415_23190 | Not Available | Positive | 4949792 - 4950949 | 42943.9 |
| oxidoreductase | DC415_23195 | Not Available | Positive | 4950949 - 4951839 | 32397.5 |
| flavin oxidoreductase | DC415_23200 | Not Available | Positive | 4951839 - 4952366 | 18882.2 |
| hypothetical protein | DC415_23205 | Not Available | Negative | 4952379 - 4952573 | 7295.94 |
| mandelate racemase | DC415_23210 | Not Available | Negative | 4952768 - 4953919 | 43154.6 |
| transcriptional regulator | DC415_23215 | Not Available | Positive | 4953991 - 4954680 | 25944.4 |
| sugar abc transporter substrate-binding protein | DC415_23220 | Not Available | Positive | 4954795 - 4956033 | 44547.9 |
| abc transporter permease | DC415_23225 | Not Available | Positive | 4956103 - 4957020 | 33744.3 |
| carbohydrate abc transporter permease | DC415_23230 | Not Available | Positive | 4957024 - 4957869 | 30921.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


