Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | DC415_23135 | Not Available | Positive | 4937243 - 4938070 | 29564.3 |
| amino acid abc transporter atp-binding protein | DC415_23140 | Not Available | Positive | 4938234 - 4939742 | 54296.2 |
| nad-binding protein | DC415_23145 | Not Available | Positive | 4939761 - 4940768 | 36241.3 |
| d-amino-acid oxidase | DC415_23150 | Not Available | Positive | 4940814 - 4941944 | 39259.6 |
| duf2218 domain-containing protein | DC415_23155 | Not Available | Negative | 4942008 - 4942295 | 10857.9 |
| alpha-glucosidase | DC415_23160 | Not Available | Negative | 4942507 - 4944498 | 74660.7 |
| sugar abc transporter permease | DC415_23165 | Not Available | Negative | 4944579 - 4945433 | 30725.7 |
| sugar abc transporter permease | DC415_23170 | Not Available | Negative | 4945437 - 4946366 | 33978.3 |
| sugar abc transporter substrate-binding protein | DC415_23175 | Not Available | Negative | 4946443 - 4947669 | 44036.5 |
| glycerol-3-phosphate abc transporter atp-binding protein | DC415_23180 | Not Available | Negative | 4947721 - 4948797 | 38787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


