Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hyld | DC415_23085 | Not Available | Negative | 4925000 - 4926031 | 36552.0 |
| rdd family protein | DC415_23090 | Not Available | Negative | 4926315 - 4927202 | 33086.6 |
| hypothetical protein | DC415_23095 | Not Available | Negative | 4927199 - 4928245 | 38243.6 |
| duf58 domain-containing protein | DC415_23100 | Not Available | Negative | 4928275 - 4929591 | 48447.3 |
| magnesium chelatase | DC415_23105 | Not Available | Negative | 4929592 - 4930548 | 35123.6 |
| hypothetical protein | DC415_23110 | Not Available | Negative | 4930535 - 4931740 | 44159.0 |
| hypothetical protein | DC415_23115 | Not Available | Negative | 4931748 - 4932329 | 21387.2 |
| duf805 domain-containing protein | DC415_23120 | Not Available | Negative | 4932458 - 4932904 | 16477.4 |
| catalase hpii | DC415_23125 | Not Available | Positive | 4933698 - 4935851 | 79551.8 |
| laci family transcriptional regulator | DC415_23130 | Not Available | Negative | 4935947 - 4937014 | 38158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


