Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | DC415_23035 | Not Available | Positive | 4913883 - 4914650 | 26306.9 |
| acetyl-coa c-acetyltransferase | DC415_23040 | Not Available | Positive | 4914675 - 4915865 | 40894.2 |
| acyl-coa dehydrogenase | DC415_23045 | Not Available | Positive | 4915865 - 4916992 | 40006.7 |
| enoyl-coa hydratase | DC415_23050 | Not Available | Positive | 4917037 - 4917810 | 27965.9 |
| 3-hydroxyisobutyryl-coa hydrolase | DC415_23055 | Not Available | Positive | 4917821 - 4918888 | 37380.7 |
| 3-hydroxyisobutyrate dehydrogenase | DC415_23060 | Not Available | Positive | 4918905 - 4919807 | 30387.7 |
| choline-sulfatase | DC415_23065 | Not Available | Negative | 4919860 - 4921374 | 57286.6 |
| glycine/betaine abc transporter substrate-binding protein | DC415_23070 | Not Available | Negative | 4921391 - 4922344 | 33998.7 |
| lysr family transcriptional regulator | DC415_23075 | Not Available | Positive | 4922438 - 4923334 | 33091.7 |
| emrb/qaca family drug resistance transporter | DC415_23080 | Not Available | Negative | 4923365 - 4924972 | 57531.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


