Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4112 domain-containing protein | DC415_22935 | Not Available | Negative | 4892231 - 4892662 | 15471.0 |
| hypothetical protein | DC415_22940 | Not Available | Negative | 4892951 - 4893298 | 13125.4 |
| oxidoreductase | DC415_22945 | Not Available | Negative | 4893346 - 4894068 | 25459.8 |
| lysr family transcriptional regulator | DC415_22950 | Not Available | Positive | 4894176 - 4895069 | 32397.8 |
| mfs transporter | DC415_22955 | Not Available | Negative | 4895136 - 4896284 | 39699.5 |
| hypothetical protein | DC415_22960 | Not Available | Positive | 4896657 - 4896971 | 11218.0 |
| hypothetical protein | DC415_22965 | Not Available | Negative | 4897324 - 4897740 | 15211.6 |
| pas domain-containing sensor histidine kinase | DC415_22970 | Not Available | Negative | 4897954 - 4899141 | 43198.9 |
| alpha/beta hydrolase | DC415_22975 | Not Available | Negative | 4899171 - 4899959 | 28484.7 |
| multidrug abc transporter atp-binding protein | DC415_22980 | Not Available | Negative | 4900308 - 4902098 | 65202.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


