Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | DC415_22885 | Not Available | Negative | 4881970 - 4882620 | 22894.6 |
| amino acid abc transporter permease | DC415_22890 | Not Available | Negative | 4882617 - 4883267 | 23291.1 |
| abc transporter substrate-binding protein | DC415_22895 | Not Available | Negative | 4883285 - 4884124 | 29583.6 |
| lysr family transcriptional regulator | DC415_22900 | Not Available | Positive | 4884234 - 4885163 | 34164.4 |
| molecular chaperone dnaj | DC415_22905 | Not Available | Negative | 4885323 - 4885928 | 21971.1 |
| dna polymerase iii subunit epsilon | DC415_22910 | Not Available | Positive | 4886144 - 4887124 | 36442.9 |
| hypothetical protein | DC415_22915 | Not Available | Positive | 4887407 - 4887679 | 10413.7 |
| hypothetical protein | DC415_22920 | Not Available | Positive | 4887995 - 4889374 | 50535.1 |
| abc transporter atp-binding protein | DC415_22925 | Not Available | Positive | 4889740 - 4891689 | 71806.4 |
| duf1810 domain-containing protein | DC415_22930 | Not Available | Negative | 4891703 - 4892125 | 15725.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


