Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DC415_22670 | Not Available | Negative | 4841230 - 4842225 | 34949.1 |
| sugar abc transporter atp-binding protein | DC415_22675 | Not Available | Negative | 4842222 - 4843727 | 54511.1 |
| tmao reductase system periplasmic protein tort | DC415_22680 | Not Available | Negative | 4843833 - 4844894 | 37309.6 |
| histone deacetylase family protein | DC415_22685 | Not Available | Negative | 4845452 - 4846513 | 38183.9 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | DC415_22690 | Not Available | Negative | 4846515 - 4847993 | 52520.9 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | DC415_22695 | Not Available | Negative | 4848012 - 4849094 | 39823.9 |
| amidase | DC415_22700 | Not Available | Negative | 4849118 - 4850554 | 50721.1 |
| aspartate aminotransferase family protein | DC415_22705 | Not Available | Negative | 4850563 - 4851927 | 48970.8 |
| gntr family transcriptional regulator | DC415_22710 | Not Available | Positive | 4852085 - 4852762 | 25011.3 |
| short-chain dehydrogenase | DC415_22715 | Not Available | Negative | 4852781 - 4853533 | 26200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


