Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase | DC415_22570 | Not Available | Negative | 4816845 - 4818092 | 46634.2 |
| duf4432 domain-containing protein | DC415_22575 | Not Available | Negative | 4818156 - 4819229 | 39624.1 |
| abc transporter permease | DC415_22580 | Not Available | Negative | 4819284 - 4820297 | 34757.4 |
| sugar abc transporter atp-binding protein | DC415_22585 | Not Available | Negative | 4820294 - 4821838 | 55954.8 |
| sugar abc transporter substrate-binding protein | DC415_22590 | Not Available | Negative | 4821847 - 4822803 | 33478.9 |
| abc transporter | DC415_22595 | Not Available | Positive | 4823075 - 4825606 | 88628.6 |
| abc transporter permease | DC415_22600 | Not Available | Positive | 4825617 - 4826639 | 35450.6 |
| sugar abc transporter substrate-binding protein | DC415_22605 | Not Available | Positive | 4826636 - 4827637 | 34991.2 |
| mannitol dehydrogenase family protein | DC415_22610 | Not Available | Positive | 4827777 - 4829297 | 54422.3 |
| l-iditol 2-dehydrogenase | DC415_22615 | Not Available | Positive | 4829294 - 4830070 | 26573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


