Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ti-type conjugative transfer system protein trag | DC415_22455 | Not Available | Negative | 4793166 - 4795109 | 69260.2 |
| conjugal transfer protein trad | DC415_22460 | Not Available | Negative | 4795096 - 4795341 | 8844.8 |
| conjugal transfer protein trac | DC415_22465 | Not Available | Negative | 4795316 - 4795612 | 10439.3 |
| ti-type conjugative transfer relaxase traa | DC415_22470 | Not Available | Positive | 4795868 - 4799170 | 123460.0 |
| conjugative transfer signal peptidase traf | DC415_22475 | Not Available | Positive | 4799167 - 4799697 | 19163.2 |
| conjugal transfer protein trab | DC415_22480 | Not Available | Positive | 4799714 - 4800913 | 43473.3 |
| conjugal transfer protein trah | DC415_22485 | Not Available | Positive | 4800925 - 4801551 | 21993.5 |
| transcriptional regulator | DC415_22490 | Not Available | Positive | 4801861 - 4802169 | 11235.7 |
| sel1 repeat family protein | DC415_22500 | Not Available | Positive | 4802383 - 4802631 | 9344.41 |
| d-3-phosphoglycerate dehydrogenase | DC415_22505 | Not Available | Negative | 4802656 - 4803720 | 38854.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


