Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | DC415_22245 | Not Available | Positive | 4751264 - 4752280 | 35048.8 |
| tetr family transcriptional regulator | DC415_22250 | Not Available | Negative | 4752656 - 4753291 | 23516.9 |
| methyltransferase | DC415_22255 | Not Available | Positive | 4753378 - 4754031 | 23735.6 |
| nmra family transcriptional regulator | DC415_22260 | Not Available | Positive | 4754090 - 4754971 | 32005.0 |
| arabinose transporter | DC415_22270 | Not Available | Positive | 4755451 - 4756623 | 40016.0 |
| arac family transcriptional regulator | DC415_22275 | Not Available | Negative | 4756884 - 4757795 | 33606.7 |
| short-chain dehydrogenase/reductase | DC415_22280 | Not Available | Positive | 4757889 - 4758716 | 29783.7 |
| hypothetical protein | DC415_22285 | Not Available | Positive | 4758740 - 4758934 | 6871.97 |
| alcohol dehydrogenase | DC415_22290 | Not Available | Negative | 4759051 - 4760100 | 38073.5 |
| tetr family transcriptional regulator | DC415_22295 | Not Available | Positive | 4760197 - 4760736 | 19820.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


