Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DC415_22195 | Not Available | Negative | 4741832 - 4742758 | 35345.9 |
| 3-isopropylmalate dehydrogenase | DC415_22200 | Not Available | Positive | 4742968 - 4744059 | 39010.9 |
| c4-dicarboxylate abc transporter substrate-binding protein | DC415_22205 | Not Available | Positive | 4744175 - 4745155 | 33764.8 |
| tripartite tricarboxylate transporter tctb family protein | DC415_22210 | Not Available | Positive | 4745181 - 4745672 | 17470.6 |
| tripartite tricarboxylate transporter tcta | DC415_22215 | Not Available | Positive | 4745710 - 4747221 | 52725.3 |
| lactate dehydrogenase | DC415_22220 | Not Available | Positive | 4747265 - 4748344 | 37893.9 |
| hydroxypyruvate isomerase | DC415_22225 | Not Available | Positive | 4748344 - 4749129 | 27873.1 |
| nadp-dependent succinic semialdehyde dehydrogenase | DC415_22230 | Not Available | Positive | 4749132 - 4750502 | 48472.1 |
| cupin domain-containing protein | DC415_22235 | Not Available | Positive | 4750511 - 4750918 | 14652.3 |
| antibiotic biosynthesis monooxygenase | DC415_22240 | Not Available | Positive | 4750930 - 4751223 | 10612.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


