Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DC415_21775 | Not Available | Positive | 4641203 - 4642186 | 34863.7 |
| peptide abc transporter permease | DC415_21780 | Not Available | Positive | 4642191 - 4643063 | 31242.8 |
| peptide abc transporter atp-binding protein | DC415_21785 | Not Available | Positive | 4643060 - 4644709 | 59654.0 |
| capsule biosynthesis protein capa | DC415_21790 | Not Available | Positive | 4644799 - 4646034 | 44987.4 |
| peptidase t | DC415_21795 | Not Available | Positive | 4646108 - 4647376 | 46957.2 |
| xre family transcriptional regulator | DC415_21800 | Not Available | Negative | 4647402 - 4647635 | 8578.19 |
| dna resolvase | DC415_21810 | Not Available | Negative | 4648252 - 4648938 | 25255.3 |
| recombinase family protein | DC415_21815 | Not Available | Negative | 4649258 - 4649836 | 21002.6 |
| undecaprenyl-phosphate glucose phosphotransferase | DC415_21820 | Not Available | Positive | 4650265 - 4651731 | 53499.3 |
| hypothetical protein | DC415_21825 | Not Available | Positive | 4651715 - 4652251 | 19954.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


