Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | DC415_21670 | Not Available | Positive | 4621133 - 4621477 | 11909.7 |
| type vi secretion protein | DC415_21675 | Not Available | Positive | 4621477 - 4621770 | 11127.0 |
| hypothetical protein | DC415_21685 | Not Available | Positive | 4624189 - 4624836 | 22222.4 |
| type vi secretion protein | DC415_21690 | Not Available | Positive | 4624837 - 4625583 | 25755.4 |
| type iv secretion protein | DC415_21695 | Not Available | Positive | 4625717 - 4626790 | 37332.3 |
| type vi secretion protein | DC415_21700 | Not Available | Positive | 4626810 - 4627550 | 27498.3 |
| conjugal transfer protein | DC415_21705 | Not Available | Positive | 4627547 - 4628350 | 29486.5 |
| conjugal transfer protein | DC415_21710 | Not Available | Positive | 4628340 - 4629587 | 44251.6 |
| p-type dna transfer atpase virb11 | DC415_21715 | Not Available | Positive | 4629547 - 4630623 | 39960.3 |
| trag protein | DC415_21720 | Not Available | Positive | 4630620 - 4633058 | 89662.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


