Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein repc | DC415_21560 | Not Available | Positive | 4605061 - 4606278 | 44589.3 |
| hypothetical protein | DC415_21565 | Not Available | Negative | 4606310 - 4606456 | 5638.85 |
| hypothetical protein | DC415_21570 | Not Available | Negative | 4606602 - 4606916 | 11448.6 |
| para family protein | DC415_21575 | Not Available | Negative | 4606913 - 4607602 | 24990.5 |
| plasmid mobilization relaxosome protein mobc | DC415_21580 | Not Available | Positive | 4608392 - 4608781 | 14069.8 |
| gnat family n-acetyltransferase | DC415_21590 | Not Available | Positive | 4612287 - 4612787 | 19159.7 |
| pin domain nuclease | DC415_21600 | Not Available | Negative | 4613573 - 4614016 | 16002.1 |
| protein transcription factor | DC415_21605 | Not Available | Negative | 4614016 - 4614255 | 8897.74 |
| hypothetical protein | DC415_21610 | Not Available | Positive | 4614254 - 4614634 | 14521.4 |
| hypothetical protein | DC415_21615 | Not Available | Negative | 4614626 - 4614808 | 6137.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


