Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_21340 | Not Available | Negative | 4554172 - 4554591 | 14660.8 |
| duf883 domain-containing protein | DC415_21345 | Not Available | Negative | 4554601 - 4554942 | 12242.5 |
| carboxynorspermidine decarboxylase | DC415_21350 | Not Available | Positive | 4555141 - 4556238 | 41046.8 |
| saccharopine dehydrogenase | DC415_21355 | Not Available | Positive | 4556317 - 4557555 | 45258.2 |
| duf2934 domain-containing protein | DC415_21360 | Not Available | Negative | 4557691 - 4557930 | 9002.61 |
| sulfate abc transporter substrate-binding protein | DC415_21365 | Not Available | Positive | 4558649 - 4559635 | 36234.6 |
| sulfate abc transporter permease subunit cyst | DC415_21370 | Not Available | Positive | 4559756 - 4560577 | 29235.5 |
| sulfate abc transporter permease subunit cysw | DC415_21375 | Not Available | Positive | 4560581 - 4561474 | 31809.5 |
| sulfate abc transporter atp-binding protein | DC415_21380 | Not Available | Positive | 4561471 - 4562505 | 38207.7 |
| peptidase m24 | DC415_21385 | Not Available | Negative | 4562587 - 4564527 | 69856.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


