Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DC415_21240 | Not Available | Positive | 4531385 - 4532410 | 36911.2 |
| iron abc transporter permease | DC415_21245 | Not Available | Positive | 4532415 - 4533434 | 34837.7 |
| histidinol phosphatase | DC415_21250 | Not Available | Positive | 4533431 - 4534219 | 28860.1 |
| pseudoazurin | DC415_21255 | Not Available | Positive | 4534216 - 4534674 | 16438.1 |
| hypothetical protein | DC415_21260 | Not Available | Positive | 4534866 - 4535177 | 11112.2 |
| udp-glucuronate 5-epimerase | DC415_21265 | Not Available | Negative | 4535196 - 4536212 | 37769.4 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DC415_21270 | Not Available | Negative | 4536231 - 4537541 | 46934.2 |
| adenylate/guanylate cyclase domain-containing protein | DC415_21275 | Not Available | Positive | 4537755 - 4538969 | 45026.4 |
| eama/rhat family transporter | DC415_21280 | Not Available | Positive | 4539164 - 4540051 | 32197.3 |
| lysr family transcriptional regulator | DC415_21285 | Not Available | Negative | 4540079 - 4540981 | 33525.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


