Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit gamma | DC415_01800 | Not Available | Positive | 364067 - 364369 | 11126.6 |
| hypothetical protein | DC415_01805 | Not Available | Positive | 364373 - 364852 | 18428.4 |
| urease subunit beta | DC415_01810 | Not Available | Positive | 364849 - 365154 | 11082.4 |
| urease-associated protein | DC415_01815 | Not Available | Positive | 365154 - 365582 | 15456.2 |
| urease subunit alpha | DC415_01820 | Not Available | Positive | 365682 - 367391 | 60801.9 |
| alpha-ketoglutarate permease | DC415_01825 | Not Available | Negative | 367623 - 368942 | 47752.7 |
| sensor histidine kinase | DC415_01830 | Not Available | Positive | 369311 - 371062 | 62802.0 |
| fis family transcriptional regulator | DC415_01835 | Not Available | Positive | 371059 - 372381 | 48226.4 |
| ggdef domain-containing protein | DC415_01840 | Not Available | Positive | 372723 - 373556 | 29860.2 |
| urease accessory protein uree | DC415_01845 | Not Available | Positive | 373756 - 374262 | 18862.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


