Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02300 family protein | DC415_21140 | Not Available | Negative | 4504786 - 4505172 | 14078.2 |
| (d)cmp kinase | DC415_21145 | Not Available | Positive | 4505399 - 4506031 | 22437.8 |
| 30s ribosomal protein s1 | DC415_21150 | Not Available | Positive | 4506200 - 4507900 | 62292.2 |
| hypothetical protein | DC415_21155 | Not Available | Negative | 4508016 - 4509629 | 55355.7 |
| ribonuclease d | DC415_21160 | Not Available | Negative | 4509852 - 4510478 | 23129.5 |
| nucleoside 2-deoxyribosyltransferase | DC415_21165 | Not Available | Positive | 4510736 - 4511305 | 20403.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase | DC415_21170 | Not Available | Positive | 4511332 - 4512084 | 27085.4 |
| nitrate reductase | DC415_21175 | Not Available | Negative | 4512452 - 4515109 | 95788.4 |
| nitrite reductase (nad(p)h) small subunit | DC415_21180 | Not Available | Negative | 4515112 - 4515441 | 11649.0 |
| nitrite reductase large subunit | DC415_21185 | Not Available | Negative | 4515545 - 4518004 | 89404.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


