Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclopentanol dehydrogenase | DC415_20990 | Not Available | Negative | 4471101 - 4471883 | 27430.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DC415_20995 | Not Available | Negative | 4471887 - 4472735 | 30002.9 |
| cupin | DC415_21000 | Not Available | Negative | 4472735 - 4473160 | 15918.6 |
| enamine deaminase rida | DC415_21005 | Not Available | Negative | 4473189 - 4473587 | 14992.2 |
| acyl-coa thioesterase | DC415_21010 | Not Available | Negative | 4473577 - 4473996 | 15854.2 |
| 3-hydroxyacyl-coa dehydrogenase | DC415_21015 | Not Available | Negative | 4474015 - 4474803 | 26834.2 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | DC415_21020 | Not Available | Negative | 4474811 - 4477123 | 86315.9 |
| llm class flavin-dependent oxidoreductase | DC415_21025 | Not Available | Negative | 4477366 - 4478490 | 40878.3 |
| hypothetical protein | DC415_21030 | Not Available | Positive | 4478713 - 4479288 | 21261.5 |
| alanine-phosphoribitol ligase | DC415_21035 | Not Available | Negative | 4479330 - 4480562 | 44536.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


