Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DC415_20940 | Not Available | Negative | 4460227 - 4461741 | 54285.4 |
| n-acetylmuramic acid 6-phosphate etherase | DC415_20945 | Not Available | Negative | 4461810 - 4462733 | 32571.6 |
| n-acetylglucosamine kinase | DC415_20950 | Not Available | Negative | 4462843 - 4463727 | 30044.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DC415_20955 | Not Available | Negative | 4463724 - 4464980 | 43694.0 |
| murr/rpir family transcriptional regulator | DC415_20960 | Not Available | Positive | 4465100 - 4465948 | 30080.3 |
| carbohydrate abc transporter permease | DC415_20965 | Not Available | Negative | 4465955 - 4466803 | 31400.3 |
| sugar abc transporter permease | DC415_20970 | Not Available | Negative | 4466800 - 4467720 | 34481.8 |
| sugar abc transporter substrate-binding protein | DC415_20975 | Not Available | Negative | 4467877 - 4469115 | 44274.7 |
| abc transporter atp-binding protein | DC415_20980 | Not Available | Negative | 4469157 - 4470227 | 39410.0 |
| hypothetical protein | DC415_20985 | Not Available | Negative | 4470247 - 4470888 | 23751.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


