Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | DC415_20890 | Not Available | Negative | 4450860 - 4451417 | 20314.0 |
| hypothetical protein | DC415_20895 | Not Available | Negative | 4451598 - 4451924 | 11988.3 |
| hypothetical protein | DC415_20900 | Not Available | Negative | 4452028 - 4452243 | 6924.85 |
| exodeoxyribonuclease vii large subunit | DC415_20905 | Not Available | Positive | 4452428 - 4454029 | 58042.6 |
| gnat family n-acetyltransferase | DC415_20910 | Not Available | Positive | 4454058 - 4454477 | 15400.3 |
| anhydro-n-acetylmuramic acid kinase | DC415_20915 | Not Available | Negative | 4454498 - 4455613 | 39267.8 |
| esterase | DC415_20920 | Not Available | Negative | 4455625 - 4456641 | 37542.7 |
| abc transporter atp-binding protein | DC415_20925 | Not Available | Negative | 4456653 - 4458404 | 63487.0 |
| diguanylate cyclase | DC415_20930 | Not Available | Negative | 4458401 - 4459243 | 30159.9 |
| glutathione abc transporter permease gsic | DC415_20935 | Not Available | Negative | 4459240 - 4460202 | 34482.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


