Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_20840 | Not Available | Negative | 4442618 - 4442974 | 13246.4 |
| duf2322 domain-containing protein | DC415_20845 | Not Available | Positive | 4443276 - 4443605 | 11747.2 |
| mfs transporter | DC415_20850 | Not Available | Positive | 4444232 - 4445569 | 48637.6 |
| hypothetical protein | DC415_20855 | Not Available | Positive | 4445599 - 4446066 | 17773.3 |
| Trna-ser | Not Available | Not Available | Positive | 4446168 - 4446257 | Not Available |
| hypothetical protein | DC415_20865 | Not Available | Positive | 4446750 - 4448219 | 54178.6 |
| hypothetical protein | DC415_20870 | Not Available | Negative | 4448143 - 4448358 | 8145.45 |
| gnat family n-acetyltransferase | DC415_20875 | Not Available | Negative | 4448362 - 4448805 | 17183.2 |
| alcohol dehydrogenase | DC415_20880 | Not Available | Negative | 4448814 - 4449764 | 34235.4 |
| arac family transcriptional regulator | DC415_20885 | Not Available | Negative | 4449868 - 4450860 | 36351.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


