Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2,4-diaminobutyrate decarboxylase | DC415_20475 | Not Available | Positive | 4351816 - 4353300 | 52547.1 |
| iuca/iucc family siderophore biosynthesis protein | DC415_20480 | Not Available | Positive | 4353287 - 4355041 | 64199.8 |
| gnat family n-acetyltransferase | DC415_20485 | Not Available | Positive | 4355034 - 4355621 | 22475.9 |
| putative histamine n-monooxygenase | DC415_20490 | Not Available | Positive | 4355624 - 4356988 | 50297.5 |
| iuca/iucc family siderophore biosynthesis protein | DC415_20495 | Not Available | Positive | 4356972 - 4358777 | 67060.3 |
| arac family transcriptional regulator | DC415_20500 | Not Available | Negative | 4358819 - 4359679 | 31412.3 |
| tonb-dependent siderophore receptor | DC415_20505 | Not Available | Positive | 4359927 - 4362164 | 80695.9 |
| n-acetyltransferase | DC415_20510 | Not Available | Positive | 4362164 - 4363267 | 41556.3 |
| arsenic transporter | DC415_20515 | Not Available | Positive | 4363745 - 4365001 | 44022.2 |
| cold-shock protein | DC415_20520 | Not Available | Negative | 4365425 - 4365628 | 7011.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


