Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | DC415_20320 | Not Available | Negative | 4320312 - 4321652 | 49471.4 |
| forkhead-associated protein | DC415_20325 | Not Available | Negative | 4321642 - 4322838 | 44086.4 |
| type vi secretion system baseplate subunit tssg | DC415_20330 | Not Available | Negative | 4322835 - 4323854 | 36931.1 |
| type vi secretion system baseplate subunit tssf | DC415_20335 | Not Available | Negative | 4323863 - 4325647 | 66008.3 |
| type vi secretion system baseplate subunit tsse | DC415_20340 | Not Available | Negative | 4325640 - 4326149 | 19199.1 |
| nitrogen fixation protein | DC415_20345 | Not Available | Negative | 4326142 - 4326969 | 30145.7 |
| type vi secretion system contractile sheath large subunit | DC415_20350 | Not Available | Negative | 4326966 - 4328360 | 51603.1 |
| type vi secretion system contractile sheath large subunit | DC415_20355 | Not Available | Negative | 4328416 - 4329897 | 55273.3 |
| type vi secretion system contractile sheath small subunit | DC415_20360 | Not Available | Negative | 4329988 - 4330497 | 19135.9 |
| type vi secretion system protein tssa | DC415_20365 | Not Available | Negative | 4330560 - 4331564 | 37165.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


