Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DC415_20270 | Not Available | Negative | 4305527 - 4306192 | 23879.9 |
| mfs transporter | DC415_20275 | Not Available | Positive | 4306458 - 4307756 | 46715.0 |
| alpha/beta hydrolase | DC415_20280 | Not Available | Positive | 4308007 - 4308825 | 29252.9 |
| duf892 domain-containing protein | DC415_20285 | Not Available | Positive | 4309081 - 4309758 | 24157.1 |
| atp-binding protein | DC415_20290 | Not Available | Negative | 4310060 - 4311235 | 41953.3 |
| capsule biosynthesis protein | DC415_20295 | Not Available | Positive | 4311762 - 4312898 | 39749.6 |
| serine/threonine protein kinase | DC415_20300 | Not Available | Negative | 4312940 - 4313848 | 33719.1 |
| type vi secretion system-associated protein tagf | DC415_20305 | Not Available | Negative | 4313823 - 4315244 | 52098.1 |
| type vi secretion system membrane subunit tssm | DC415_20310 | Not Available | Negative | 4315325 - 4318807 | 128969.0 |
| type vi secretion system protein tssl | DC415_20315 | Not Available | Negative | 4318804 - 4320315 | 55343.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


