Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_20220 | Not Available | Negative | 4293185 - 4294558 | 49168.5 |
| dna-binding response regulator | DC415_20225 | Not Available | Negative | 4294563 - 4295240 | 25397.0 |
| duf2218 domain-containing protein | DC415_20230 | Not Available | Negative | 4295583 - 4296644 | 39211.3 |
| abc transporter atp-binding protein | DC415_20235 | Not Available | Negative | 4296641 - 4297471 | 30227.8 |
| abc transporter permease | DC415_20240 | Not Available | Negative | 4297468 - 4298517 | 35712.8 |
| iron abc transporter permease | DC415_20245 | Not Available | Negative | 4298514 - 4299557 | 35711.8 |
| abc transporter substrate-binding protein | DC415_20250 | Not Available | Negative | 4299554 - 4300549 | 35517.6 |
| tonb-dependent siderophore receptor | DC415_20255 | Not Available | Positive | 4300829 - 4302955 | 78190.9 |
| arac family transcriptional regulator | DC415_20260 | Not Available | Negative | 4302992 - 4303891 | 33426.9 |
| histidine kinase | DC415_20265 | Not Available | Negative | 4304108 - 4305526 | 50694.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


