Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | DC415_20170 | Not Available | Positive | 4279498 - 4279890 | 14060.1 |
| llm class flavin-dependent oxidoreductase | DC415_20175 | Not Available | Negative | 4280002 - 4281321 | 48521.4 |
| ai-2e family transporter | DC415_20180 | Not Available | Positive | 4281595 - 4283598 | 71558.9 |
| ggdef domain-containing protein | DC415_20185 | Not Available | Positive | 4283928 - 4285088 | 41834.3 |
| hypothetical protein | DC415_20190 | Not Available | Negative | 4285281 - 4287041 | 61907.1 |
| hypothetical protein | DC415_20195 | Not Available | Negative | 4287126 - 4289480 | 83074.7 |
| batb protein | DC415_20200 | Not Available | Negative | 4289482 - 4290513 | 37023.3 |
| duf4381 domain-containing protein | DC415_20205 | Not Available | Negative | 4290510 - 4290950 | 16324.8 |
| duf58 domain-containing protein | DC415_20210 | Not Available | Negative | 4290971 - 4291891 | 34328.0 |
| aaa family atpase | DC415_20215 | Not Available | Negative | 4291909 - 4292892 | 36308.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


