Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | DC415_20120 | Not Available | Negative | 4269036 - 4269578 | 20048.2 |
| hypothetical protein | DC415_20125 | Not Available | Positive | 4269836 - 4270825 | 35118.6 |
| (2fe-2s)-binding protein | DC415_20130 | Not Available | Positive | 4270947 - 4271480 | 19078.9 |
| molybdopterin dehydrogenase | DC415_20135 | Not Available | Positive | 4271477 - 4272466 | 35233.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DC415_20140 | Not Available | Positive | 4272463 - 4274769 | 82661.7 |
| aliphatic sulfonates abc transporter substrate-binding protein | DC415_20145 | Not Available | Negative | 4274854 - 4275807 | 33050.6 |
| sulfonate abc transporter atp-binding protein | DC415_20150 | Not Available | Negative | 4275853 - 4276557 | 25752.2 |
| abc transporter permease | DC415_20155 | Not Available | Negative | 4276554 - 4277378 | 29290.8 |
| alkanesulfonate monooxygenase | DC415_20160 | Not Available | Negative | 4277383 - 4278516 | 41680.1 |
| abc transporter | DC415_20165 | Not Available | Negative | 4278518 - 4279288 | 27818.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


