Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | DC415_19870 | Not Available | Negative | 4210765 - 4213053 | 83788.3 |
| catalase | DC415_19875 | Not Available | Negative | 4213113 - 4214186 | 39392.6 |
| dna helicase recq | DC415_19880 | Not Available | Positive | 4214401 - 4216260 | 68097.3 |
| hypothetical protein | DC415_19885 | Not Available | Positive | 4216384 - 4217106 | 26474.8 |
| hypothetical protein | DC415_19890 | Not Available | Negative | 4217114 - 4217731 | 23037.8 |
| hypothetical protein | DC415_19895 | Not Available | Positive | 4217930 - 4218616 | 24919.8 |
| peptide abc transporter | DC415_19900 | Not Available | Positive | 4219046 - 4220575 | 56397.4 |
| peptide abc transporter | DC415_19905 | Not Available | Positive | 4220750 - 4221658 | 32724.1 |
| peptide abc transporter permease | DC415_19910 | Not Available | Positive | 4221674 - 4222552 | 31750.7 |
| amidohydrolase/deacetylase family metallohydrolase | DC415_19915 | Not Available | Positive | 4222554 - 4223756 | 43111.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


