Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | DC415_19715 | Not Available | Negative | 4174575 - 4177061 | 90020.5 |
| ornithine cyclodeaminase family protein | DC415_19720 | Not Available | Negative | 4177066 - 4178016 | 33988.8 |
| sensor histidine kinase | DC415_19730 | Not Available | Negative | 4179866 - 4181236 | 49792.6 |
| dna-binding response regulator | DC415_19735 | Not Available | Negative | 4181233 - 4181895 | 24164.1 |
| hypothetical protein | DC415_19740 | Not Available | Positive | 4182031 - 4182537 | 17482.9 |
| tetr family transcriptional regulator | DC415_19745 | Not Available | Negative | 4182642 - 4183289 | 24069.6 |
| tet(a)/tet(b)/tet(c) family tetracycline efflux mfs transporter | DC415_19750 | Not Available | Positive | 4183375 - 4184589 | 42875.2 |
| cytosine deaminase | DC415_19755 | Not Available | Negative | 4184606 - 4185814 | 42906.0 |
| abc transporter atp-binding protein | DC415_19760 | Not Available | Negative | 4185880 - 4186857 | 35738.2 |
| methionine abc transporter atp-binding protein | DC415_19765 | Not Available | Negative | 4186854 - 4187852 | 35336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


