Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DC415_19515 | Not Available | Positive | 4128212 - 4128577 | 13364.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DC415_19520 | Not Available | Positive | 4128738 - 4131173 | 88942.9 |
| nitroreductase | DC415_19525 | Not Available | Negative | 4131450 - 4132049 | 21976.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DC415_19530 | Not Available | Positive | 4132182 - 4133024 | 29688.6 |
| polyhydroxyalkanoate depolymerase | DC415_19535 | Not Available | Positive | 4133190 - 4134425 | 46290.5 |
| hypothetical protein | DC415_19540 | Not Available | Positive | 4134470 - 4135237 | 28543.6 |
| phosphoribosylanthranilate isomerase | DC415_19545 | Not Available | Positive | 4135340 - 4135999 | 23163.6 |
| tryptophan synthase subunit beta | DC415_19550 | Not Available | Positive | 4136011 - 4137231 | 43935.8 |
| tryptophan synthase subunit alpha | DC415_19555 | Not Available | Positive | 4137233 - 4138060 | 29152.1 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | DC415_19560 | Not Available | Positive | 4138226 - 4139119 | 32730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


